Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2884 family protein | C9Y90_11175 | Not Available | Negative | 2323480 - 2324199 | 26430.8 |
| duf469 domain-containing protein | C9Y90_11180 | Not Available | Negative | 2324383 - 2324709 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | C9Y90_11185 | Not Available | Negative | 2324709 - 2325428 | 27308.9 |
| adenine dna glycosylase | C9Y90_11190 | Not Available | Positive | 2325589 - 2326641 | 39160.2 |
| oxidative damage protection protein | C9Y90_11195 | Not Available | Positive | 2326669 - 2326944 | 10953.2 |
| membrane-bound lytic murein transglycosylase mltc | C9Y90_11200 | Not Available | Positive | 2327009 - 2328088 | 40114.7 |
| nucleoside permease nupg | C9Y90_11205 | Not Available | Positive | 2328290 - 2329546 | 46391.0 |
| ornithine decarboxylase | C9Y90_11210 | Not Available | Negative | 2329595 - 2331730 | 79451.5 |
| duf554 domain-containing protein | C9Y90_11215 | Not Available | Positive | 2332128 - 2332835 | 24659.5 |
| Trna-phe | Not Available | Not Available | Positive | 2332941 - 2333011 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





