Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | C9Y90_10560 | Not Available | Negative | 2195781 - 2197856 | 79658.3 |
| hnh endonuclease | C9Y90_10565 | Not Available | Negative | 2198026 - 2198898 | 33200.6 |
| hnh endonuclease | C9Y90_10570 | Not Available | Positive | 2198980 - 2199102 | 4657.81 |
| sialate o-acetylesterase | C9Y90_10575 | Not Available | Negative | 2199110 - 2200090 | 36890.9 |
| yjht family mutarotase | C9Y90_10580 | Not Available | Negative | 2200155 - 2201261 | 39523.2 |
| n-acetylneuraminic acid channel protein | C9Y90_10585 | Not Available | Negative | 2201281 - 2201997 | 27938.5 |
| type 1 fimbriae regulatory protein fimb | C9Y90_10590 | Not Available | Positive | 2203454 - 2204056 | 22994.8 |
| type 1 fimbriae regulatory protein fime | C9Y90_10595 | Not Available | Positive | 2204534 - 2205130 | 23117.6 |
| hypothetical protein | C9Y90_10605 | Not Available | Negative | 2206520 - 2206882 | 12853.3 |
| hypothetical protein | C9Y90_10610 | Not Available | Negative | 2206879 - 2207091 | 8069.88 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





