Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C9Y90_10300 | Not Available | Positive | 2133577 - 2134599 | 35458.0 |
| sugar abc transporter permease yjff | C9Y90_10305 | Not Available | Positive | 2134586 - 2135581 | 35058.0 |
| fructose 1,6-bisphosphatase | C9Y90_10310 | Not Available | Negative | 2135614 - 2136612 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C9Y90_10315 | Not Available | Positive | 2136788 - 2138161 | 49882.0 |
| ribosome-associated protein | C9Y90_10320 | Not Available | Negative | 2138317 - 2138868 | 21360.5 |
| metalloprotease pmba | C9Y90_10325 | Not Available | Positive | 2138963 - 2140315 | 48372.4 |
| soluble cytochrome b562 | C9Y90_10330 | Not Available | Positive | 2140498 - 2140884 | 14061.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | C9Y90_10335 | Not Available | Negative | 2140929 - 2141393 | 17450.9 |
| anaerobic ribonucleoside-triphosphate reductase | C9Y90_10340 | Not Available | Negative | 2141552 - 2143690 | 80027.0 |
| alpha,alpha-phosphotrehalase | C9Y90_10345 | Not Available | Negative | 2144084 - 2145739 | 63864.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





