Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | C9Y90_10195 | Not Available | Positive | 2110195 - 2110842 | 24685.6 |
| hypothetical protein | C9Y90_10200 | Not Available | Negative | 2110826 - 2111464 | 23506.9 |
| peptidylprolyl isomerase | C9Y90_10205 | Not Available | Positive | 2111523 - 2111669 | 5494.88 |
| peptidylprolyl isomerase | C9Y90_10210 | Not Available | Positive | 2111683 - 2112303 | 22217.5 |
| d-serine/d-alanine/glycine transporter | C9Y90_10215 | Not Available | Positive | 2112612 - 2114024 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | C9Y90_10220 | Not Available | Negative | 2114069 - 2114731 | 24884.1 |
| dmt family transporter | C9Y90_10225 | Not Available | Negative | 2114839 - 2115804 | 35249.6 |
| sdr family oxidoreductase | C9Y90_10230 | Not Available | Negative | 2115912 - 2116772 | 29726.2 |
| transcriptional regulator | C9Y90_10235 | Not Available | Positive | 2116861 - 2117241 | 14076.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9Y90_10245 | Not Available | Positive | 2119503 - 2120243 | 27191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





