Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deda | C9Y90_09890 | Not Available | Negative | 2054217 - 2054876 | 24511.7 |
| trna pseudouridine(38-40) synthase trua | C9Y90_09895 | Not Available | Negative | 2054959 - 2055771 | 30402.3 |
| aspartate-semialdehyde dehydrogenase | C9Y90_09900 | Not Available | Negative | 2055771 - 2056784 | 36338.1 |
| 4-phosphoerythronate dehydrogenase pdxb | C9Y90_09905 | Not Available | Negative | 2056850 - 2057986 | 41307.9 |
| flagella biosynthesis regulator flk | C9Y90_09910 | Not Available | Positive | 2058085 - 2059080 | 36626.4 |
| mfs transporter | C9Y90_09915 | Not Available | Negative | 2059077 - 2060255 | 40455.7 |
| 3-oxoacyl-acp synthase i | C9Y90_09920 | Not Available | Negative | 2060539 - 2061759 | 42629.8 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C9Y90_09925 | Not Available | Positive | 2061918 - 2063924 | 74510.2 |
| yfcl family protein | C9Y90_09930 | Not Available | Negative | 2064045 - 2064323 | 10000.6 |
| elongation factor p hydroxylase | C9Y90_09935 | Not Available | Negative | 2064357 - 2064905 | 21160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





