Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase | C9Y90_23040 | Not Available | Positive | 4668256 - 4669215 | 34883.6 |
| Chromosome partitioning protein | C9Y90_23045 | Not Available | Positive | 4669220 - 4669531 | 11238.4 |
| Hypothetical protein | C9Y90_23050 | Not Available | Positive | 4669595 - 4669978 | 14233.9 |
| hypothetical protein | C9Y90_23055 | Not Available | Negative | 4670070 - 4670600 | 20172.6 |
| hypothetical protein | C9Y90_23060 | Not Available | Negative | 4670491 - 4670742 | 9851.07 |
| hypothetical protein | C9Y90_23065 | Not Available | Negative | 4670639 - 4670929 | 11084.6 |
| Pbsx family portal protein | C9Y90_23070 | Not Available | Negative | 4671130 - 4672176 | 39273.1 |
| Helix-turn-helix domain-containing protein | C9Y90_23075 | Not Available | Negative | 4672176 - 4673927 | 66861.3 |
| Capsid scaffolding protein | C9Y90_23080 | Not Available | Positive | 4674082 - 4674918 | 30648.0 |
| Major capsid protein, p2 family | C9Y90_23085 | Not Available | Positive | 4674942 - 4675994 | 39196.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





