Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | C9Y90_09580 | Not Available | Negative | 1989577 - 1990179 | 22290.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | C9Y90_09585 | Not Available | Positive | 1990487 - 1991626 | 41653.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C9Y90_09590 | Not Available | Positive | 1991630 - 1992598 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | C9Y90_09595 | Not Available | Positive | 1992598 - 1994580 | 74259.1 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | C9Y90_09600 | Not Available | Positive | 1994577 - 1995467 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | C9Y90_09605 | Not Available | Positive | 1995467 - 1997119 | 62526.8 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | C9Y90_09610 | Not Available | Positive | 1997116 - 1997451 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | C9Y90_09615 | Not Available | Positive | 1997451 - 1997837 | 14116.1 |
| signal transduction protein pmrd | C9Y90_09620 | Not Available | Negative | 1997831 - 1998097 | 9871.03 |
| o-succinylbenzoate--coa ligase | C9Y90_09625 | Not Available | Negative | 1998207 - 1999562 | 50134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





