Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate metabolism regulatory protein atoc | C9Y90_09425 | Not Available | Positive | 1946726 - 1948111 | 52179.6 |
| acetate coa-transferase subunit alpha | C9Y90_09430 | Not Available | Positive | 1948307 - 1948969 | 23527.7 |
| coa transferase subunit b | C9Y90_09435 | Not Available | Positive | 1948969 - 1949619 | 22992.1 |
| short-chain fatty acids transporter | C9Y90_09440 | Not Available | Positive | 1949616 - 1950938 | 47530.6 |
| acetyl-coa c-acetyltransferase | C9Y90_09445 | Not Available | Positive | 1950969 - 1952153 | 40386.1 |
| duf2135 domain-containing protein | C9Y90_09450 | Not Available | Negative | 1952227 - 1953003 | 28243.2 |
| duf2300 domain-containing protein | C9Y90_09455 | Not Available | Negative | 1953008 - 1954657 | 61479.2 |
| alpha-2-macroglobulin family protein | C9Y90_09460 | Not Available | Negative | 1954658 - 1959052 | 162568.0 |
| duf1175 domain-containing protein | C9Y90_09465 | Not Available | Negative | 1959196 - 1959819 | 23730.5 |
| duf2138 domain-containing protein | C9Y90_09470 | Not Available | Negative | 1959816 - 1961504 | 62646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





