Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase riha | C9Y90_09125 | Not Available | Negative | 1883182 - 1884117 | 33824.9 |
| glutamate/aspartate transport atp-binding protein gltl | C9Y90_09130 | Not Available | Negative | 1884235 - 1884960 | 26662.7 |
| glutamate abc transporter permease | C9Y90_09135 | Not Available | Negative | 1884960 - 1885634 | 24916.2 |
| amino acid abc transporter permease | C9Y90_09140 | Not Available | Negative | 1885634 - 1886374 | 27456.2 |
| amino acid abc transporter substrate-binding protein | C9Y90_09145 | Not Available | Negative | 1886544 - 1887452 | 33378.9 |
| rhomboid family intramembrane serine protease | C9Y90_09150 | Not Available | Positive | 1887907 - 1889784 | 67520.6 |
| hypothetical protein | C9Y90_09155 | Not Available | Positive | 1889759 - 1889962 | 7632.21 |
| apolipoprotein n-acyltransferase | C9Y90_09160 | Not Available | Negative | 1889862 - 1891400 | 57042.1 |
| magnesium and cobalt efflux protein corc | C9Y90_09165 | Not Available | Negative | 1891425 - 1892303 | 33300.4 |
| endoribonuclease ybey | C9Y90_09170 | Not Available | Negative | 1892393 - 1892860 | 17526.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





