Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase dpib | C9Y90_08970 | Not Available | Positive | 1851948 - 1853606 | 61659.7 |
| two-component response regulator | C9Y90_08975 | Not Available | Positive | 1853575 - 1854255 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | C9Y90_08980 | Not Available | Negative | 1854296 - 1855681 | 48473.3 |
| phospholipid:lipid a palmitoyltransferase | C9Y90_08985 | Not Available | Positive | 1856269 - 1856829 | 21785.6 |
| cold-shock protein cspe | C9Y90_08990 | Not Available | Positive | 1857004 - 1857213 | 7463.84 |
| fluoride efflux transporter crcb | C9Y90_08995 | Not Available | Negative | 1857266 - 1857649 | 13766.1 |
| deaminated glutathione amidase | C9Y90_09000 | Not Available | Positive | 1857742 - 1858530 | 28658.0 |
| twin-arginine translocase subunit tate | C9Y90_09005 | Not Available | Positive | 1858659 - 1858859 | 6895.55 |
| lipoyl synthase | C9Y90_09010 | Not Available | Negative | 1858960 - 1859925 | 36073.8 |
| dna-binding transcriptional regulator | C9Y90_09015 | Not Available | Negative | 1860134 - 1861087 | 35952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





