Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inverse autotransporter invasin ycho | C9Y90_06620 | Not Available | Positive | 1352334 - 1353728 | 52172.8 |
| two-component system response regulator narl | C9Y90_06625 | Not Available | Negative | 1353729 - 1354379 | 23928.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | C9Y90_06630 | Not Available | Negative | 1354372 - 1356168 | 67031.9 |
| nitrate/nitrite transporter nark | C9Y90_06635 | Not Available | Positive | 1356507 - 1357898 | 49696.3 |
| nitrate reductase subunit alpha | C9Y90_06640 | Not Available | Positive | 1358414 - 1362157 | 140466.0 |
| nitrate reductase subunit beta | C9Y90_06645 | Not Available | Positive | 1362154 - 1363692 | 58083.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | C9Y90_06650 | Not Available | Positive | 1363689 - 1364399 | 26444.3 |
| respiratory nitrate reductase subunit gamma | C9Y90_06655 | Not Available | Positive | 1364399 - 1365076 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 1365439 - 1365523 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1365558 - 1365642 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





