Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_04950 | Not Available | Negative | 1014454 - 1015122 | 25560.3 |
| oxygen-dependent choline dehydrogenase | C9Y90_04955 | Not Available | Negative | 1015335 - 1017005 | 61851.1 |
| betaine-aldehyde dehydrogenase | C9Y90_04960 | Not Available | Negative | 1017019 - 1018491 | 52778.1 |
| transcriptional regulator beti | C9Y90_04965 | Not Available | Negative | 1018505 - 1019092 | 21806.4 |
| choline bcct transporter bett | C9Y90_04970 | Not Available | Positive | 1019221 - 1021254 | 75846.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9Y90_04975 | Not Available | Positive | 1021827 - 1025810 | 140769.0 |
| eal domain-containing protein | C9Y90_04980 | Not Available | Positive | 1025952 - 1027040 | 40606.3 |
| lysr family transcriptional regulator | C9Y90_04985 | Not Available | Negative | 1027082 - 1028014 | 34812.9 |
| duf1097 domain-containing protein | C9Y90_04990 | Not Available | Negative | 1028106 - 1028603 | 17326.0 |
| transcriptional regulator | C9Y90_04995 | Not Available | Positive | 1028861 - 1029466 | 21688.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





