Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | C9Y90_04690 | Not Available | Positive | 961676 - 963208 | 54578.5 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | C9Y90_04695 | Not Available | Positive | 963219 - 964607 | 48726.0 |
| ai-2 transporter tqsa | C9Y90_04700 | Not Available | Negative | 964632 - 965666 | 37545.3 |
| hypothetical protein | C9Y90_04705 | Not Available | Positive | 965801 - 965971 | 6483.71 |
| multidrug/spermidine efflux smr transporter subunit mdtj | C9Y90_04710 | Not Available | Positive | 966078 - 966443 | 13115.7 |
| spermidine export protein mdti | C9Y90_04715 | Not Available | Positive | 966430 - 966759 | 11720.8 |
| serine protease | C9Y90_04720 | Not Available | Negative | 966798 - 967619 | 29252.6 |
| hypothetical protein | C9Y90_04725 | Not Available | Negative | 967719 - 967802 | 3206.2 |
| acid shock protein | C9Y90_04730 | Not Available | Negative | 967895 - 968230 | 11538.0 |
| mfs transporter | C9Y90_04735 | Not Available | Negative | 968627 - 969880 | 45260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





