Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | C9Y90_03920 | Not Available | Negative | 804012 - 804560 | 20582.1 |
| tvp38/tmem64 family protein | C9Y90_03925 | Not Available | Negative | 804560 - 805267 | 26140.8 |
| protein ydjy | C9Y90_03930 | Not Available | Negative | 805282 - 805959 | 24144.6 |
| tvp38/tmem64 family protein | C9Y90_03935 | Not Available | Negative | 805964 - 806674 | 26068.7 |
| exodeoxyribonuclease iii | C9Y90_03940 | Not Available | Negative | 806841 - 807647 | 30970.9 |
| succinylornithine aminotransferase | C9Y90_03945 | Not Available | Positive | 808093 - 809313 | 43625.7 |
| arginine n-succinyltransferase | C9Y90_03950 | Not Available | Positive | 809310 - 810344 | 38429.9 |
| succinylglutamate-semialdehyde dehydrogenase | C9Y90_03955 | Not Available | Positive | 810341 - 811819 | 53077.4 |
| n-succinylarginine dihydrolase | C9Y90_03960 | Not Available | Positive | 811816 - 813159 | 49343.4 |
| succinylglutamate desuccinylase | C9Y90_03965 | Not Available | Positive | 813152 - 814120 | 35802.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





