Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0039 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1272867 bp
Thymine Count
1269683 bp
Guanine Count
1302839 bp
Cytosine Count
1286422 bp
Genome Length
5141161 bp
Protein-coding Genes
4737 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y90_19895 | Not Available | Positive | 4100951 - 4101349 | 15243.7 |
| Hypothetical protein | C9Y90_19900 | Not Available | Negative | 4101430 - 4101588 | 5949.94 |
| hypothetical protein | C9Y90_19905 | Not Available | Negative | 4101674 - 4102417 | 28427.0 |
| Bacteriophage antiterminator protein q | C9Y90_19910 | Not Available | Negative | 4102602 - 4103291 | 26152.2 |
| Hypothetical protein | C9Y90_19915 | Not Available | Negative | 4103306 - 4103428 | 4833.04 |
| lipid a deacylase lpxr family protein | C9Y90_19920 | Not Available | Positive | 4103766 - 4104725 | 34935.9 |
| Late gene regulator q | C9Y90_19925 | Not Available | Negative | 4104869 - 4104940 | 2664.3 |
| Nini protein | C9Y90_19930 | Not Available | Negative | 4104937 - 4105602 | 25102.1 |
| Ning protein | C9Y90_19935 | Not Available | Negative | 4105599 - 4106201 | 23947.8 |
| Putative hnh endonuclease | C9Y90_19940 | Not Available | Negative | 4106176 - 4106742 | 21925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





