Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | C9Y88_13065 | Not Available | Positive | 2713512 - 2715014 | 57170.3 |
| Ogr/delta-like zinc finger family protein | C9Y88_13070 | Not Available | Positive | 2715258 - 2715518 | 9722.37 |
| Hok/gef family protein | C9Y88_13075 | Not Available | Positive | 2715709 - 2715849 | 5256.61 |
| Dna-binding hu protein | C9Y88_13080 | Not Available | Negative | 2716156 - 2716455 | 11426.6 |
| Attl | Not Available | Not Available | Positive | 3146228 - 3146239 | Not Available |
| Integrase | C9Y88_15265 | Not Available | Positive | 3153977 - 3155074 | 41758.1 |
| Hypothetical protein | C9Y88_15270 | Not Available | Positive | 3155136 - 3155384 | 9391.2 |
| Tail fiber assembly protein | C9Y88_15275 | Not Available | Negative | 3155500 - 3155667 | 6155.16 |
| ferredoxin | C9Y88_15280 | Not Available | Positive | 3155780 - 3155899 | 4258.13 |
| bfpt-regulated chaperone | C9Y88_15285 | Not Available | Negative | 3155886 - 3156476 | 22514.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





