Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hypa | C9Y88_04305 | Not Available | Positive | 912547 - 912897 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | C9Y88_04310 | Not Available | Positive | 912901 - 913773 | 31566.8 |
| hydrogenase assembly protein hypc | C9Y88_04315 | Not Available | Positive | 913764 - 914036 | 9732.58 |
| hydrogenase formation protein hypd | C9Y88_04320 | Not Available | Positive | 914036 - 915157 | 41366.7 |
| hydrogenase expression/formation protein hype | C9Y88_04325 | Not Available | Positive | 915154 - 916164 | 35096.6 |
| formate hydrogenlyase transcriptional activator flha | C9Y88_04330 | Not Available | Positive | 916238 - 918316 | 78638.8 |
| nitrous oxide-stimulated promoter family protein | C9Y88_04335 | Not Available | Negative | 918353 - 918706 | 13960.3 |
| dna mismatch repair protein muts | C9Y88_04340 | Not Available | Positive | 918993 - 921554 | 95324.6 |
| protein-serine/threonine phosphatase | C9Y88_04345 | Not Available | Positive | 921660 - 922316 | 25102.7 |
| deor/glpr transcriptional regulator | C9Y88_04350 | Not Available | Negative | 922367 - 923134 | 27407.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





