Escherichia coli strain FWSEC0035

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0035 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe. This strain is capable of existing in both aerobic and anaerobic environments, which contributes to its versatility in various habitats. The organism typically arranges itself in pairs or as single cells and possesses flagella, indicating motility. FWSEC0035 is mesophilic, with an optimal growth temperature of 37°C, which aligns with the average human body temperature, underscoring its association with host organisms. This strain is found in a variety of hosts, including Homo sapiens, domestic animals such as Gallus gallus (chickens) and Sus scrofa (pigs), as well as in plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). The broad range of hosts indicates its adaptability and potential for cross-species transmission. The health effects linked to FWSEC0035 are significant, as it is associated with numerous clinical conditions including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Its pathogenicity in humans is notable, contributing to severe health issues such as hemolytic uremic syndrome (HUS) and septicemia. The free-living biotic relationship of FWSEC0035 suggests that it plays a role in both the microbiota of its hosts and in environmental contexts. Understanding the pathogenicity and ecological relationships of this strain can provide insights into public health challenges, particularly in relation to foodborne infections and the transmission of antibiotic resistance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0035

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0035
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0035 plasmid unnamed4

Gene Summary

Adenine Count

1289523 bp

Thymine Count

1276972 bp

Guanine Count

1286651 bp

Cytosine Count

1308266 bp

Genome Length

5174562 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

196 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acrylyl-coa reductase acuiC9Y88_03140Not AvailableNegative677675 - 67864934739.8
rnase e specificity factor csrdC9Y88_03145Not AvailablePositive678801 - 68074173345.6
hypothetical proteinC9Y88_03150Not AvailableNegative680750 - 6809387062.6
rod shape-determining proteinC9Y88_03155Not AvailablePositive681046 - 68208936954.7
rod shape-determining protein mrecC9Y88_03160Not AvailablePositive682155 - 68325839562.8
rod shape-determining protein mredC9Y88_03165Not AvailablePositive683258 - 68374618788.9
septum formation inhibitor mafC9Y88_03170Not AvailablePositive683755 - 68434821430.6
ribonuclease gC9Y88_03175Not AvailablePositive684338 - 68580755367.4
asma2 domain-containing proteinC9Y88_03180Not AvailablePositive685875 - 689675139106.0
metalloprotease tlddC9Y88_03185Not AvailablePositive689831 - 69127651367.2

Displaying genes 751 – 760 of 5088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total