Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 3 membrane subunit | C9Y88_02465 | Not Available | Positive | 527503 - 528450 | 34298.3 |
| hydrogenase 4 subunit d | C9Y88_02470 | Not Available | Positive | 528467 - 529906 | 51745.6 |
| hydrogenase-4 component e | C9Y88_02475 | Not Available | Positive | 529918 - 530568 | 23363.0 |
| hydrogenase 4 subunit f | C9Y88_02480 | Not Available | Positive | 530573 - 532153 | 56548.4 |
| hydrogenase large subunit | C9Y88_02485 | Not Available | Positive | 532143 - 533810 | 63384.1 |
| hydrogenase 4 subunit h | C9Y88_02490 | Not Available | Positive | 533820 - 534365 | 20229.5 |
| formate hydrogenlyase maturation protein hych | C9Y88_02500 | Not Available | Positive | 535112 - 535525 | 15533.7 |
| sigma-54-dependent fis family transcriptional regulator | C9Y88_02505 | Not Available | Positive | 535555 - 537567 | 75364.8 |
| formate transporter | C9Y88_02510 | Not Available | Positive | 537589 - 538437 | 30577.3 |
| ai-2e family transporter | C9Y88_02515 | Not Available | Negative | 538475 - 539536 | 39196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





