Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | C9Y88_01910 | Not Available | Negative | 415004 - 416167 | 42601.8 |
| acid-sensing system dna-binding response regulator evga | C9Y88_01915 | Not Available | Positive | 416583 - 417197 | 22691.5 |
| acid-sensing system histidine kinase evgs | C9Y88_01920 | Not Available | Positive | 417202 - 420795 | 134745.0 |
| acetyl-coa--oxalate coa-transferase | C9Y88_01925 | Not Available | Negative | 420851 - 421996 | 41673.2 |
| transporter yfdv | C9Y88_01930 | Not Available | Negative | 422070 - 423014 | 33617.9 |
| oxalyl-coa decarboxylase | C9Y88_01935 | Not Available | Negative | 423084 - 424778 | 60614.9 |
| formyl-coa--oxalate coa-transferase | C9Y88_01940 | Not Available | Negative | 424832 - 426082 | 45830.7 |
| yfdx family protein | C9Y88_01945 | Not Available | Negative | 426595 - 427227 | 22907.4 |
| lipoprotein | C9Y88_01950 | Not Available | Positive | 427523 - 427798 | 10210.5 |
| duf2545 family protein | C9Y88_01955 | Not Available | Negative | 427875 - 428117 | 8923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





