Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | C9Y88_26400 | Not Available | Positive | 5106667 - 5107368 | 26698.4 |
| trbi/virb10 family protein | C9Y88_26405 | Not Available | Positive | 5107358 - 5108497 | 41205.2 |
| p-type dna transfer atpase virb11 | C9Y88_26410 | Not Available | Positive | 5108516 - 5109571 | 39831.7 |
| type iv secretory system conjugative dna transfer family protein | C9Y88_26415 | Not Available | Positive | 5109587 - 5111545 | 73351.0 |
| piln family type ivb pilus formation outer membrane protein | C9Y88_26420 | Not Available | Positive | 5111596 - 5113239 | 58024.9 |
| pilin accessory family protein | C9Y88_26425 | Not Available | Positive | 5113278 - 5114600 | 49794.2 |
| type iv pilus biogenesis protein pilp | C9Y88_26430 | Not Available | Positive | 5114584 - 5115078 | 17678.3 |
| type ii secretion protein e | C9Y88_26435 | Not Available | Positive | 5115103 - 5116641 | 57253.2 |
| type ii secretion protein f | C9Y88_26440 | Not Available | Positive | 5116632 - 5117741 | 41817.3 |
| hypothetical protein | C9Y88_26445 | Not Available | Positive | 5117786 - 5118343 | 19812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





