Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | C9Y88_25860 | Not Available | Positive | 5040436 - 5042727 | 86904.0 |
| relaxase nikb | C9Y88_25865 | Not Available | Negative | 5042764 - 5045463 | 104046.0 |
| nika protein | C9Y88_25870 | Not Available | Negative | 5045474 - 5045806 | 12644.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | C9Y88_25875 | Not Available | Positive | 5046040 - 5046375 | 12432.7 |
| duf4942 domain-containing protein | C9Y88_25880 | Not Available | Negative | 5046461 - 5047195 | 28246.8 |
| is21-like element is100 family transposase | C9Y88_25885 | Not Available | Positive | 5047315 - 5048337 | 39903.2 |
| aaa family atpase | C9Y88_25890 | Not Available | Positive | 5048334 - 5049116 | 29485.9 |
| xre family transcriptional regulator | C9Y88_25900 | Not Available | Positive | 5049849 - 5050100 | 9836.78 |
| hypothetical protein | C9Y88_25905 | Not Available | Negative | 5050131 - 5050325 | 7257.69 |
| rpn family recombination-promoting nuclease/putative transposase | C9Y88_25910 | Not Available | Negative | 5050388 - 5051278 | 34089.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





