Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilr | C9Y88_25595 | Not Available | Negative | 4994250 - 4995335 | 40677.8 |
| atp-binding protein | C9Y88_25600 | Not Available | Negative | 4995348 - 4996901 | 58129.1 |
| type iv pilus biogenesis protein pilp | C9Y88_25605 | Not Available | Negative | 4996912 - 4997364 | 16067.3 |
| pilus assembly protein pilo | C9Y88_25610 | Not Available | Negative | 4997351 - 4998646 | 48062.5 |
| piln family type ivb pilus formation outer membrane protein | C9Y88_25615 | Not Available | Negative | 4998639 - 5000321 | 59854.8 |
| pilus assembly protein pilp | C9Y88_25620 | Not Available | Negative | 5000335 - 5000772 | 15718.0 |
| pili assembly chaperone | C9Y88_25625 | Not Available | Negative | 5000772 - 5001839 | 38549.9 |
| pili assembly chaperone | C9Y88_25630 | Not Available | Negative | 5001873 - 5002466 | 23361.2 |
| pilus assembly protein | C9Y88_25635 | Not Available | Negative | 5002644 - 5002898 | 9900.89 |
| conjugal transfer protein trac | C9Y88_25645 | Not Available | Negative | 5003070 - 5003753 | 25925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





