Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | C9Y88_25055 | Not Available | Negative | 4922783 - 4923416 | 23955.2 |
| duf826 domain-containing protein | C9Y88_25060 | Not Available | Positive | 4923431 - 4923685 | 9068.62 |
| holin | C9Y88_25065 | Not Available | Positive | 4923762 - 4923977 | 7978.76 |
| lysozyme | C9Y88_25075 | Not Available | Positive | 4924540 - 4924861 | 11538.1 |
| lysozyme | C9Y88_25080 | Not Available | Negative | 4924967 - 4925500 | 19593.5 |
| hypothetical protein | C9Y88_25085 | Not Available | Negative | 4925545 - 4925727 | 6767.7 |
| hypothetical protein | C9Y88_25090 | Not Available | Positive | 4925660 - 4925932 | 10342.7 |
| hypothetical protein | C9Y88_25095 | Not Available | Positive | 4925881 - 4926225 | 12984.8 |
| holin | C9Y88_25100 | Not Available | Negative | 4926188 - 4926303 | 4297.33 |
| phage portal protein | C9Y88_25105 | Not Available | Negative | 4926304 - 4927717 | 51460.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





