Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector cif | C9Y88_24345 | Not Available | Negative | 4836300 - 4837085 | 29599.3 |
| t3ss effector protein nleh | C9Y88_24350 | Not Available | Negative | 4837352 - 4838233 | 32435.0 |
| phage tail protein | C9Y88_24355 | Not Available | Negative | 4838339 - 4838608 | 9976.31 |
| site-specific integrase | C9Y88_24365 | Not Available | Negative | 4839620 - 4840792 | 44256.4 |
| excisionase | C9Y88_24370 | Not Available | Negative | 4840747 - 4840962 | 8350.94 |
| hypothetical protein | C9Y88_24375 | Not Available | Negative | 4840981 - 4841115 | 5475.57 |
| duf4222 domain-containing protein | C9Y88_24380 | Not Available | Negative | 4841119 - 4841361 | 9567.64 |
| duf551 domain-containing protein | C9Y88_24385 | Not Available | Negative | 4841449 - 4841757 | 11298.6 |
| rhs repeat protein | C9Y88_24390 | Not Available | Positive | 4841763 - 4844873 | 115886.0 |
| phage major capsid protein | C9Y88_24400 | Not Available | Negative | 4847973 - 4849910 | 69069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





