Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbriae regulatory protein fime | C9Y88_01490 | Not Available | Negative | 320552 - 321148 | 23117.6 |
| integrase | C9Y88_01495 | Not Available | Negative | 321626 - 322228 | 22967.8 |
| n-acetylneuraminic acid outer membrane channel protein nanc | C9Y88_01500 | Not Available | Positive | 323684 - 324400 | 27889.4 |
| n-acetylneuraminate epimerase | C9Y88_01505 | Not Available | Positive | 324420 - 325526 | 39559.3 |
| sialate o-acetylesterase | C9Y88_01510 | Not Available | Positive | 325591 - 326571 | 36841.8 |
| hnh endonuclease | C9Y88_01515 | Not Available | Negative | 326579 - 326701 | 4657.81 |
| hnh endonuclease | C9Y88_01520 | Not Available | Positive | 326783 - 327655 | 33128.5 |
| duf1819 family protein | C9Y88_01530 | Not Available | Positive | 329059 - 329661 | 22600.1 |
| duf1788 domain-containing protein | C9Y88_01535 | Not Available | Positive | 329658 - 330260 | 22846.7 |
| brex system p-loop protein brxc | C9Y88_01540 | Not Available | Positive | 330272 - 333913 | 139280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





