Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | C9Y88_22055 | Not Available | Negative | 4480099 - 4480608 | 19343.6 |
| duf494 domain-containing protein | C9Y88_22065 | Not Available | Positive | 4481818 - 4482291 | 18484.2 |
| hypothetical protein | C9Y88_22070 | Not Available | Positive | 4482320 - 4482862 | 19862.0 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C9Y88_22075 | Not Available | Positive | 4482867 - 4483439 | 20641.7 |
| shikimate dehydrogenase | C9Y88_22080 | Not Available | Positive | 4483444 - 4484262 | 29465.4 |
| duf1488 domain-containing protein | C9Y88_22085 | Not Available | Positive | 4484259 - 4484516 | 10007.5 |
| gamma carbonic anhydrase family protein | C9Y88_22090 | Not Available | Negative | 4484492 - 4485046 | 20246.3 |
| damage-inducible protein dini | C9Y88_22100 | Not Available | Negative | 4485691 - 4485799 | 4239.31 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4486071 - 4486433 | Not Available |
| ssra-binding protein smpb | C9Y88_22110 | Not Available | Negative | 4486648 - 4487130 | 18270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





