Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein gogb | C9Y88_21295 | Not Available | Positive | 4338011 - 4339372 | 51049.9 |
| secretion protein espo | C9Y88_21300 | Not Available | Positive | 4339433 - 4339708 | 10257.3 |
| nleb | C9Y88_21305 | Not Available | Negative | 4339788 - 4339913 | 5129.03 |
| transposase | C9Y88_21310 | Not Available | Negative | 4339936 - 4340514 | 22032.0 |
| type iii secretion system effector e3 ubiquitin ligase nlel | C9Y88_21320 | Not Available | Negative | 4344674 - 4347022 | 87551.5 |
| hypothetical protein | C9Y88_21325 | Not Available | Negative | 4347042 - 4347131 | 3267.02 |
| phage tail protein | C9Y88_21335 | Not Available | Negative | 4347238 - 4347438 | 7335.98 |
| glutamate racemase | C9Y88_21340 | Not Available | Negative | 4347630 - 4348487 | 31133.8 |
| tonb-dependent vitamin b12 receptor btub | C9Y88_21345 | Not Available | Negative | 4348432 - 4350276 | 68381.6 |
| trna (uridine(54)-c5)-methyltransferase trma | C9Y88_21350 | Not Available | Positive | 4350645 - 4351745 | 41916.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





