Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | C9Y88_20835 | Not Available | Negative | 4244766 - 4245848 | 40320.1 |
| type vi secretion system baseplate subunit tssf | C9Y88_20840 | Not Available | Negative | 4245812 - 4247662 | 71190.0 |
| type vi secretion system baseplate subunit tsse | C9Y88_20845 | Not Available | Negative | 4247666 - 4248079 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9Y88_20850 | Not Available | Negative | 4248086 - 4249561 | 55704.1 |
| hypothetical protein | C9Y88_20855 | Not Available | Negative | 4249612 - 4249836 | 8411.01 |
| type vi secretion system contractile sheath small subunit | C9Y88_20860 | Not Available | Negative | 4249871 - 4250371 | 18047.5 |
| hcp family type vi secretion system effector | C9Y88_20865 | Not Available | Positive | 4251068 - 4251586 | 19256.8 |
| type vi secretion system tip protein vgrg | C9Y88_20870 | Not Available | Positive | 4251796 - 4253180 | 52887.0 |
| duf2496 domain-containing protein | C9Y88_20875 | Not Available | Negative | 4253312 - 4253473 | 6094.32 |
| primosomal replication protein n'' | C9Y88_20880 | Not Available | Negative | 4253487 - 4254014 | 20360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





