Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine dehydrogenase | C9Y88_20560 | Not Available | Positive | 4188767 - 4189918 | 40342.6 |
| aldehyde dehydrogenase | C9Y88_20565 | Not Available | Positive | 4190083 - 4191621 | 56339.5 |
| hypothetical protein | C9Y88_20570 | Not Available | Negative | 4191840 - 4192043 | 7680.78 |
| duf3302 domain-containing protein | C9Y88_20575 | Not Available | Positive | 4192166 - 4192489 | 12404.2 |
| hlyd family secretion protein | C9Y88_20580 | Not Available | Positive | 4192495 - 4193631 | 41744.6 |
| lysr family transcriptional regulator | C9Y88_20585 | Not Available | Negative | 4193628 - 4194602 | 37276.5 |
| mipa/ompv family protein | C9Y88_20590 | Not Available | Positive | 4194726 - 4195466 | 27383.9 |
| l-ribulose-5-phosphate 4-epimerase | C9Y88_20600 | Not Available | Negative | 4195813 - 4196508 | 25620.3 |
| l-ribulose-5-phosphate 3-epimerase | C9Y88_20605 | Not Available | Negative | 4196502 - 4197362 | 32513.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9Y88_20610 | Not Available | Negative | 4197355 - 4198017 | 23562.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





