Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m85 | C9Y88_20345 | Not Available | Negative | 4147503 - 4148516 | 38066.1 |
| hypothetical protein | C9Y88_20355 | Not Available | Positive | 4149723 - 4150139 | 15958.7 |
| hypothetical protein | C9Y88_20360 | Not Available | Negative | 4150211 - 4151959 | 66523.2 |
| atp-binding protein | C9Y88_20365 | Not Available | Negative | 4151961 - 4153679 | 66115.7 |
| protein csid | C9Y88_20375 | Not Available | Positive | 4155240 - 4156217 | 37386.6 |
| l-2-hydroxyglutarate oxidase | C9Y88_20380 | Not Available | Positive | 4156237 - 4157505 | 46113.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9Y88_20385 | Not Available | Positive | 4157528 - 4158976 | 51788.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9Y88_20390 | Not Available | Positive | 4158990 - 4160270 | 45690.3 |
| gaba permease | C9Y88_20395 | Not Available | Positive | 4160581 - 4161981 | 51155.1 |
| transcriptional regulator | C9Y88_20400 | Not Available | Positive | 4162002 - 4162664 | 24992.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





