Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine repressor | C9Y88_19060 | Not Available | Negative | 3881978 - 3883198 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | C9Y88_19065 | Not Available | Negative | 3883207 - 3884355 | 40951.5 |
| glucosamine-6-phosphate deaminase | C9Y88_19070 | Not Available | Negative | 3884415 - 3885215 | 29775.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | C9Y88_19075 | Not Available | Positive | 3885548 - 3887494 | 68335.9 |
| glutamine--trna ligase | C9Y88_19080 | Not Available | Positive | 3887697 - 3889361 | 63481.3 |
| chitoporin | C9Y88_19085 | Not Available | Positive | 3889807 - 3891213 | 52748.8 |
| hypothetical protein | C9Y88_19090 | Not Available | Positive | 3891263 - 3891589 | 11999.3 |
| ferric iron uptake transcriptional regulator | C9Y88_19095 | Not Available | Negative | 3891673 - 3892119 | 16795.8 |
| fur leader peptide | C9Y88_19100 | Not Available | Negative | 3892112 - 3892198 | 3108.72 |
| flavodoxin-1 | C9Y88_19105 | Not Available | Negative | 3892408 - 3892938 | 19737.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





