Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C9Y88_17200 | Not Available | Negative | 3531482 - 3532381 | 33256.5 |
| response regulator transcription factor | C9Y88_17205 | Not Available | Positive | 3532901 - 3533503 | 22605.6 |
| alpha,alpha-trehalase tref | C9Y88_17210 | Not Available | Negative | 3533554 - 3535203 | 63748.1 |
| c-type cytochrome | C9Y88_17215 | Not Available | Positive | 3535608 - 3537005 | 51543.3 |
| glutamate decarboxylase | C9Y88_17220 | Not Available | Positive | 3537216 - 3537537 | 12425.7 |
| duf2303 family protein | C9Y88_17225 | Not Available | Positive | 3537538 - 3537814 | 10451.9 |
| hd family hydrolase | C9Y88_17230 | Not Available | Positive | 3537942 - 3538478 | 20325.5 |
| eae protein | C9Y88_17235 | Not Available | Positive | 3538469 - 3538819 | 13210.7 |
| class i sam-dependent methyltransferase | C9Y88_17240 | Not Available | Positive | 3538816 - 3539289 | 18343.3 |
| hypothetical protein | C9Y88_17245 | Not Available | Positive | 3539436 - 3539852 | 15855.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





