Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9Y88_00725 | Not Available | Positive | 162472 - 163131 | 24890.1 |
| co-chaperone djla | C9Y88_00730 | Not Available | Negative | 163248 - 164063 | 30567.2 |
| lps assembly protein lptd | C9Y88_00735 | Not Available | Positive | 164318 - 166672 | 89645.8 |
| peptidylprolyl isomerase sura | C9Y88_00740 | Not Available | Positive | 166725 - 168011 | 47255.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | C9Y88_00745 | Not Available | Positive | 168011 - 169000 | 35210.9 |
| ribosomal rna small subunit methyltransferase a | C9Y88_00750 | Not Available | Positive | 168997 - 169818 | 30422.0 |
| co2+/mg2+ efflux protein apag | C9Y88_00755 | Not Available | Positive | 169821 - 170198 | 13897.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | C9Y88_00760 | Not Available | Positive | 170205 - 171053 | 31532.6 |
| duf4291 domain-containing protein | C9Y88_00765 | Not Available | Positive | 171078 - 171677 | 22902.5 |
| antitoxin | C9Y88_00775 | Not Available | Negative | 172279 - 172458 | 6841.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





