Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9Y88_00680 | Not Available | Positive | 148413 - 150023 | 59361.6 |
| thiamine abc transporter atp-binding protein | C9Y88_00685 | Not Available | Positive | 150007 - 150705 | 25041.7 |
| deda family protein | C9Y88_00690 | Not Available | Negative | 150819 - 151583 | 28171.7 |
| arabinose operon transcriptional regulator arac | C9Y88_00695 | Not Available | Negative | 151669 - 152547 | 33411.8 |
| ribulokinase | C9Y88_00700 | Not Available | Positive | 152886 - 154586 | 61115.7 |
| l-arabinose isomerase | C9Y88_00705 | Not Available | Positive | 154597 - 156099 | 56105.2 |
| l-ribulose-5-phosphate 4-epimerase | C9Y88_00710 | Not Available | Positive | 156268 - 156963 | 25520.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 156923 - 157299 | Not Available |
| dna polymerase ii | C9Y88_00715 | Not Available | Positive | 157038 - 159389 | 90069.6 |
| rna polymerase-associated protein rapa | C9Y88_00720 | Not Available | Positive | 159554 - 162460 | 109731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





