Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | C9Y88_13990 | Not Available | Negative | 2888320 - 2889771 | 52962.9 |
| impact family member yigz | C9Y88_13995 | Not Available | Negative | 2889810 - 2890424 | 21758.1 |
| xaa-pro dipeptidase | C9Y88_14000 | Not Available | Negative | 2890424 - 2891755 | 50118.9 |
| fatty acid oxidation complex subunit alpha fadb | C9Y88_14005 | Not Available | Positive | 2891945 - 2894134 | 79597.5 |
| acetyl-coa c-acyltransferase fada | C9Y88_14010 | Not Available | Positive | 2894144 - 2895307 | 40926.7 |
| nad(p)h-flavin reductase | C9Y88_14015 | Not Available | Negative | 2895500 - 2896201 | 26243.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C9Y88_14020 | Not Available | Negative | 2896247 - 2897740 | 55606.8 |
| transcription/translation regulatory transformer protein rfah | C9Y88_14025 | Not Available | Positive | 2897907 - 2898395 | 18341.3 |
| tat-linked quality control protein tatd | C9Y88_14030 | Not Available | Negative | 2898392 - 2899174 | 29061.7 |
| sec-independent protein translocase subunit tatc | C9Y88_14035 | Not Available | Negative | 2899216 - 2899992 | 28877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





