Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | C9Y88_12505 | Not Available | Negative | 2596858 - 2597484 | 23089.5 |
| mfs transporter | C9Y88_12510 | Not Available | Positive | 2597799 - 2598947 | 41462.2 |
| inner membrane transporter ycam | C9Y88_12515 | Not Available | Positive | 2599156 - 2600586 | 52499.5 |
| lysr family transcriptional regulator | C9Y88_12520 | Not Available | Negative | 2600587 - 2601495 | 34188.2 |
| nad(p)h oxidoreductase | C9Y88_12525 | Not Available | Positive | 2601595 - 2602185 | 23013.3 |
| pyruvate formate lyase 1-activating protein | C9Y88_12530 | Not Available | Negative | 2602267 - 2603007 | 28205.9 |
| formate acetyltransferase 1 | C9Y88_12535 | Not Available | Negative | 2603199 - 2605481 | 85362.0 |
| formate transporter foca | C9Y88_12540 | Not Available | Negative | 2605536 - 2606393 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C9Y88_12545 | Not Available | Negative | 2606799 - 2608559 | 65655.0 |
| duf421 domain-containing protein | C9Y88_12550 | Not Available | Positive | 2608689 - 2609381 | 26283.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





