Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napf | C9Y88_12290 | Not Available | Negative | 2545823 - 2546317 | 18048.3 |
| ecotin | C9Y88_12295 | Not Available | Positive | 2546726 - 2547214 | 18166.0 |
| malate dehydrogenase (quinone) | C9Y88_12300 | Not Available | Negative | 2547274 - 2548965 | 62226.5 |
| microcin j25 efflux abc transporter yoji | C9Y88_12305 | Not Available | Negative | 2549183 - 2550826 | 61591.4 |
| dna oxidative demethylase alkb | C9Y88_12310 | Not Available | Negative | 2550902 - 2551552 | 24002.7 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C9Y88_12315 | Not Available | Negative | 2551552 - 2552616 | 39344.0 |
| fad:protein fmn transferase apbe | C9Y88_12320 | Not Available | Negative | 2552690 - 2553745 | 38583.0 |
| porin ompc | C9Y88_12325 | Not Available | Negative | 2553857 - 2554948 | 40097.0 |
| phosphotransferase rcsd | C9Y88_12330 | Not Available | Positive | 2555687 - 2558359 | 100370.0 |
| transcriptional regulator rcsb | C9Y88_12335 | Not Available | Positive | 2558376 - 2559026 | 23672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





