Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | C9Y88_11915 | Not Available | Negative | 2468229 - 2469161 | 33855.3 |
| yip1 family protein | C9Y88_11920 | Not Available | Negative | 2469335 - 2469922 | 21692.0 |
| deda family protein | C9Y88_11925 | Not Available | Positive | 2470092 - 2470670 | 21422.9 |
| sdr family oxidoreductase | C9Y88_11930 | Not Available | Negative | 2470800 - 2471561 | 26979.4 |
| multidrug resistance outer membrane protein mdtq | C9Y88_11935 | Not Available | Negative | 2471614 - 2473140 | 55638.3 |
| protein yohp | C9Y88_11940 | Not Available | Positive | 2473274 - 2473357 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | C9Y88_11945 | Not Available | Negative | 2473745 - 2474695 | 35339.7 |
| hypothetical protein | C9Y88_11950 | Not Available | Positive | 2474934 - 2475332 | 14593.6 |
| cidb/lrgb family autolysis modulator | C9Y88_11955 | Not Available | Positive | 2475329 - 2476024 | 24499.1 |
| cytidine deaminase | C9Y88_11960 | Not Available | Positive | 2476154 - 2477038 | 31541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





