Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Nini protein | C9Y88_07420 | Not Available | Negative | 1543916 - 1544581 | 25099.2 |
| Ning protein | C9Y88_07425 | Not Available | Negative | 1544578 - 1545180 | 23934.8 |
| Putative hnh endonuclease | C9Y88_07430 | Not Available | Negative | 1545155 - 1545721 | 21955.3 |
| Hypothetical protein | C9Y88_07435 | Not Available | Positive | 1546257 - 1547189 | 34776.1 |
| Hypothetical protein | C9Y88_07440 | Not Available | Positive | 1547228 - 1548055 | 30754.2 |
| hypothetical | C9Y88_07445 | Not Available | Negative | 1548407 - 1548592 | 7087.4 |
| Hypothetical protein | C9Y88_07450 | Not Available | Negative | 1548559 - 1548741 | 7636.32 |
| Hypothetical protein | C9Y88_07455 | Not Available | Positive | 1548898 - 1549242 | 12710.4 |
| Excisionase | C9Y88_07460 | Not Available | Positive | 1549348 - 1549566 | 8665.58 |
| Integrase | C9Y88_07465 | Not Available | Positive | 1549544 - 1550614 | 40116.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





