Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp phosphodiesterase | C9Y88_09295 | Not Available | Negative | 1935764 - 1936345 | 22943.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9Y88_09300 | Not Available | Positive | 1936438 - 1937508 | 39415.0 |
| trna guanosine(34) transglycosylase tgt | C9Y88_09305 | Not Available | Positive | 1937564 - 1938691 | 42596.1 |
| preprotein translocase subunit yajc | C9Y88_09310 | Not Available | Positive | 1938714 - 1939046 | 11887.9 |
| protein translocase subunit secd | C9Y88_09315 | Not Available | Positive | 1939074 - 1940921 | 66636.3 |
| protein translocase subunit secf | C9Y88_09320 | Not Available | Positive | 1940932 - 1941903 | 35384.6 |
| hnh nuclease family protein | C9Y88_09325 | Not Available | Positive | 1942031 - 1942378 | 13380.7 |
| nucleoside-specific channel-forming protein tsx | C9Y88_09330 | Not Available | Negative | 1942555 - 1943439 | 33590.6 |
| duf3251 domain-containing protein | C9Y88_09335 | Not Available | Negative | 1943738 - 1944277 | 19633.6 |
| transcriptional regulator nrdr | C9Y88_09340 | Not Available | Positive | 1944428 - 1944877 | 17229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





