Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee chaperone cesd2 | C9Y88_06670 | Not Available | Negative | 1399769 - 1400176 | 15786.8 |
| eaeb | C9Y88_06675 | Not Available | Negative | 1400183 - 1401145 | 32899.2 |
| secretion protein espd | C9Y88_06680 | Not Available | Negative | 1401166 - 1402308 | 39141.4 |
| type iii secretion system lee translocon filament protein espa | C9Y88_06685 | Not Available | Negative | 1402321 - 1402899 | 20507.2 |
| tyea family type iii secretion system gatekeeper subunit | C9Y88_06690 | Not Available | Negative | 1402958 - 1404013 | 39921.8 |
| type iii secretion system lee inner membrane ring protein escd | C9Y88_06695 | Not Available | Positive | 1404156 - 1405376 | 45235.7 |
| intimin type gamma | C9Y88_06700 | Not Available | Negative | 1405664 - 1408471 | 101487.0 |
| type iii secretion system lee chaperone cest | C9Y88_06705 | Not Available | Negative | 1408529 - 1408999 | 17680.9 |
| translocated intimin receptor tir | C9Y88_06710 | Not Available | Negative | 1409133 - 1410788 | 56978.6 |
| t3ss effector protein map | C9Y88_06715 | Not Available | Negative | 1411111 - 1411722 | 22638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





