Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein d | C9Y88_05415 | Not Available | Positive | 1135858 - 1136682 | 31163.7 |
| trimeric intracellular cation channel family protein | C9Y88_05420 | Not Available | Positive | 1136974 - 1137591 | 22049.8 |
| nad-dependent dna ligase ligb | C9Y88_05425 | Not Available | Negative | 1137588 - 1139105 | 56820.3 |
| hypothetical protein | C9Y88_05430 | Not Available | Negative | 1139127 - 1139384 | 9058.65 |
| guanylate kinase | C9Y88_05435 | Not Available | Positive | 1139524 - 1140147 | 23594.1 |
| dna-directed rna polymerase subunit omega | C9Y88_05440 | Not Available | Positive | 1140202 - 1140477 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C9Y88_05445 | Not Available | Positive | 1140496 - 1142604 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9Y88_05450 | Not Available | Positive | 1142611 - 1143300 | 25344.6 |
| atp-dependent dna helicase recg | C9Y88_05455 | Not Available | Positive | 1143306 - 1145387 | 76435.1 |
| hypothetical protein | C9Y88_05460 | Not Available | Negative | 1145372 - 1146238 | 33220.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





