Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C9Y88_05040 | Not Available | Negative | 1065813 - 1066547 | 27576.6 |
| hypothetical protein | C9Y88_05045 | Not Available | Negative | 1066588 - 1066875 | 10756.6 |
| prgh/eprh family type iii secretion apparatus protein | C9Y88_05055 | Not Available | Negative | 1067149 - 1068330 | 45220.7 |
| luxr family transcriptional regulator | C9Y88_05060 | Not Available | Positive | 1068588 - 1069019 | 16341.7 |
| invasion protein | C9Y88_05065 | Not Available | Positive | 1069090 - 1069383 | 11103.2 |
| flhb hrpn yscu spas family protein | C9Y88_05070 | Not Available | Negative | 1069444 - 1069806 | 13791.5 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C9Y88_05080 | Not Available | Negative | 1070573 - 1071340 | 28236.9 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C9Y88_05085 | Not Available | Negative | 1071342 - 1071602 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C9Y88_05090 | Not Available | Negative | 1071612 - 1072277 | 24544.5 |
| yscq/hrcq family type iii secretion apparatus protein | C9Y88_05095 | Not Available | Negative | 1072267 - 1072839 | 21960.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





