Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1289523 bp
Thymine Count
1276972 bp
Guanine Count
1286651 bp
Cytosine Count
1308266 bp
Genome Length
5174562 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | C9Y88_04715 | Not Available | Positive | 999605 - 1001380 | 64980.3 |
| l-fuculokinase | C9Y88_04720 | Not Available | Positive | 1001489 - 1002907 | 52219.6 |
| l-fucose mutarotase | C9Y88_04725 | Not Available | Positive | 1002909 - 1003331 | 15474.0 |
| l-fucose operon activator | C9Y88_04730 | Not Available | Positive | 1003389 - 1004120 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | C9Y88_04735 | Not Available | Negative | 1004164 - 1005264 | 41889.4 |
| duf423 domain-containing protein | C9Y88_04740 | Not Available | Negative | 1005257 - 1005652 | 14334.0 |
| glycine cleavage system transcriptional activator | C9Y88_04745 | Not Available | Negative | 1005671 - 1006588 | 34403.4 |
| ygdi/ygdr family lipoprotein | C9Y88_04750 | Not Available | Negative | 1006939 - 1007166 | 8174.67 |
| cysteine desulfurase csda | C9Y88_04755 | Not Available | Positive | 1007358 - 1008563 | 43306.7 |
| cysteine desulfurase sulfur acceptor subunit csde | C9Y88_04760 | Not Available | Positive | 1008563 - 1009006 | 15927.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





