Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Y83_21890 | Not Available | Negative | 4382465 - 4383379 | 33993.4 |
| hcp family type vi secretion system effector | C9Y83_21895 | Not Available | Negative | 4383423 - 4383905 | 18000.5 |
| hypothetical protein | C9Y83_21900 | Not Available | Negative | 4383929 - 4385281 | 50685.3 |
| type vi secretion system membrane subunit tssm | C9Y83_21905 | Not Available | Negative | 4385292 - 4388726 | 130997.0 |
| type vi secretion system protein tssa | C9Y83_21910 | Not Available | Negative | 4388835 - 4390247 | 52362.2 |
| type vi secretion system-associated protein tago | C9Y83_21915 | Not Available | Negative | 4390252 - 4390782 | 19012.8 |
| duf2002 family protein | C9Y83_21920 | Not Available | Negative | 4390802 - 4391146 | 13066.5 |
| duf883 domain-containing protein | C9Y83_21925 | Not Available | Positive | 4391298 - 4391627 | 11847.9 |
| glutaredoxin-like protein nrdh | C9Y83_21930 | Not Available | Positive | 4391875 - 4392120 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | C9Y83_21935 | Not Available | Positive | 4392117 - 4392527 | 15341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





