Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | C9Y83_21235 | Not Available | Negative | 4248846 - 4249775 | 32306.4 |
| ribose abc transporter substrate-binding protein rbsb | C9Y83_21240 | Not Available | Negative | 4249901 - 4250791 | 30940.2 |
| ribose abc transporter permease | C9Y83_21245 | Not Available | Negative | 4250816 - 4251781 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | C9Y83_21250 | Not Available | Negative | 4251786 - 4253291 | 55004.0 |
| d-ribose pyranase | C9Y83_21255 | Not Available | Negative | 4253299 - 4253718 | 15284.4 |
| low affinity potassium transport system protein kup | C9Y83_21260 | Not Available | Negative | 4253885 - 4255753 | 69298.3 |
| atpase rava | C9Y83_21265 | Not Available | Positive | 4255976 - 4257472 | 56406.1 |
| protein viaa | C9Y83_21270 | Not Available | Positive | 4257466 - 4258917 | 55910.6 |
| aspartate--ammonia ligase | C9Y83_21275 | Not Available | Negative | 4258922 - 4259914 | 36665.7 |
| asnc family transcriptional regulator | C9Y83_21280 | Not Available | Positive | 4260066 - 4260524 | 16888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





