Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | C9Y83_17790 | Not Available | Positive | 3577319 - 3578074 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 3578153 - 3578226 | Not Available |
| site-specific integrase | C9Y83_17800 | Not Available | Positive | 3578361 - 3579986 | 61036.8 |
| duf4145 domain-containing protein | C9Y83_17805 | Not Available | Positive | 3579987 - 3580616 | 23820.6 |
| hypothetical protein | C9Y83_17810 | Not Available | Negative | 3581464 - 3582270 | 28500.6 |
| duf2877 domain-containing protein | C9Y83_17815 | Not Available | Negative | 3582260 - 3583123 | 32324.6 |
| transcriptional regulator | C9Y83_17820 | Not Available | Negative | 3583163 - 3583768 | 21688.3 |
| duf1097 domain-containing protein | C9Y83_17825 | Not Available | Positive | 3584026 - 3584523 | 17326.0 |
| lysr family transcriptional regulator | C9Y83_17830 | Not Available | Positive | 3584615 - 3585547 | 34798.9 |
| eal domain-containing protein | C9Y83_17835 | Not Available | Negative | 3585589 - 3586677 | 40606.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





