Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerd | C9Y83_17640 | Not Available | Positive | 3537649 - 3538545 | 34248.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | C9Y83_17645 | Not Available | Positive | 3538570 - 3539280 | 25595.1 |
| single-stranded-dna-specific exonuclease recj | C9Y83_17650 | Not Available | Positive | 3539286 - 3541019 | 63306.6 |
| peptide chain release factor 2 | C9Y83_17655 | Not Available | Positive | 3541110 - 3542208 | 41222.9 |
| lysine--trna ligase | C9Y83_17660 | Not Available | Positive | 3542218 - 3543735 | 57620.8 |
| isopentenyl-diphosphate delta-isomerase | C9Y83_17665 | Not Available | Negative | 3543778 - 3544326 | 20374.1 |
| hypothetical protein | C9Y83_17670 | Not Available | Positive | 3544381 - 3544452 | 2617.29 |
| hypothetical protein | C9Y83_17675 | Not Available | Negative | 3544449 - 3544574 | 4791.29 |
| uric acid transporter uact | C9Y83_17680 | Not Available | Negative | 3544576 - 3546024 | 51761.4 |
| oxidoreductase (fe-s)-binding subunit | C9Y83_17685 | Not Available | Positive | 3546465 - 3548384 | 69135.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





