Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase fdhd | C9Y83_17590 | Not Available | Negative | 3528148 - 3528981 | 30533.8 |
| sulfate abc transporter substrate-binding protein | C9Y83_17595 | Not Available | Positive | 3529175 - 3529762 | 21369.5 |
| formate dehydrogenase-n subunit alpha | C9Y83_17600 | Not Available | Positive | 3529811 - 3532225 | 89574.2 |
| formate dehydrogenase-o iron-sulfur subunit | C9Y83_17605 | Not Available | Positive | 3532238 - 3533140 | 33102.1 |
| formate dehydrogenase cytochrome b556(fdo) subunit | C9Y83_17610 | Not Available | Positive | 3533137 - 3533772 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | C9Y83_17615 | Not Available | Positive | 3533769 - 3534698 | 34690.5 |
| pp_03480 | C9Y83_17620 | Not Available | Negative | 3535099 - 3536079 | Not Available |
| antitoxin cptb | C9Y83_17625 | Not Available | Positive | 3536322 - 3536588 | 10547.7 |
| hypothetical protein | C9Y83_17630 | Not Available | Positive | 3536569 - 3536976 | 16081.0 |
| flavodoxin-2 | C9Y83_17635 | Not Available | Negative | 3537016 - 3537537 | 19701.2 |
Pathways
937 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





